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Diagnostics show some fields not Indexed

I am having issues with my update not completing (config still shows 8.03 and I tried 8.1 and 8.1.1. I ran diagnostics and see these Yellow warnings. Can anyone tell me if they indicate a problem?

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YES --- Account file "modules/Accounts/Account.php" exists
NO! --- DynamicField is not an index in $beanFiles
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NO! --- Connectors is not an index in $beanFiles
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NO! --- Version is not an index in $beanFiles
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NO! --- CustomFields is not an index in $beanFiles